[torqueusers] pbs/torque / RHEL6 - drmaa library integration

Eva Hocks hocks at sdsc.edu
Tue Oct 22 15:52:59 MDT 2013




Is anybody working on it? I am running 4.2.5 and a user claims it worked
until a few days ago, now he is getting the error

-bash: line 1: /var/spool/torque/mom_priv/jobs/889146.tscc-mgr.local.SC:
No such file or directory


Where are the torque provided drmaa libraries?

Thanks
Eva



On Tue, 15 Oct 2013, Spencer Owen wrote:

> Benji,
>
> It seems that drmaa support is broken in torque 4.x. It will most likely
> require a patch because the drmaa code is still referring to the old
> pbs_submit() function instead of the newer pbs_submit_hash()
>
>
>
>
> On Tue, Oct 15, 2013 at 5:08 PM, Benji Wakely <B.Wakely at latrobe.edu.au>wrote:
>
> >  Greetings,****
> >
> > ** **
> >
> > Short version:****
> >
> > Anyone have any experience and/or luck with drmaa****
> >
> > submitting / interacting with torque running on RHEL6.****
> >
> > ** **
> >
> > Trying to hook up a particular product (clcbio) with a torque/pbs server,*
> > ***
> >
> > it interacts through drmaa, which isn't working.****
> >
> > ** **
> >
> > ** **
> >
> > Long version:****
> >
> > ** **
> >
> > We have a pair of servers (as opposed to a HPC cluster),****
> >
> > so for normal job submission from one host to another,****
> >
> > we've simply installed the RHEL6 packages for torque from the 'epel'
> > repository.
> > (v. 2.5.7-9, e.g. torque-server-2.5.7-9.el6.x86_64)****
> >
> > ** **
> >
> > ** **
> >
> > On the submission host (client), I can submit jobs to (server)****
> >
> > using qsub****
> >
> > (Interactive jobs fail, but I can live with that for now - batch
> > submission jobs succeed.)****
> >
> > ** **
> >
> > ** **
> >
> > Clcbio don't support torque/pbs, and I don't want to push that support
> > burden onto this list,****
> >
> > but what I would like to know is:****
> >
> > ** **
> >
> > Has anyone has successfully configured/installed libdrmaa****
> >
> > to submit / interact with torque running on RHEL6?****
> >
> > ** **
> >
> > Anyone have a simple wrapper script to call an external arbitrary libdrmaa
> > library,****
> >
> > as opposed to a perl/python library?****
> >
> > I'm interested in testing someone else's libdrmaa functionality,****
> >
> > not in using a better wheel.****
> >
> > ** **
> >
> > Best regards,****
> >
> > --Benji****
> >
> > ** **
> >
> > Benji Wakely <b.wakely at latrobe.edu.au>****
> >
> > Unix Systems Administrator****
> >
> > La Trobe University****
> >
> > +613 9479 5499****
> >
> > +614 34 307 667****
> >
> > ****
> >
> > ** **
> >
> > _______________________________________________
> > torqueusers mailing list
> > torqueusers at supercluster.org
> > http://www.supercluster.org/mailman/listinfo/torqueusers
> >
> >
>
>
>




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