[torqueusers] Job can't find the execubtale

Fabio Andrijauskas biozit.listas at gmail.com
Thu Jan 24 12:38:55 MST 2013


Thank you very much


2013/1/24 Coyle, James J [ITACD] <jjc at iastate.edu>

>  Fabio,****
>
> ** **
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>   How else is it going to find it your executable?****
>
> ** **
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>   It is very common to use a common filesystem, such as NFS or Lustre .***
> *
>
> You can copy the executable, but yu alsos need all data, etc.****
>
> ** **
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>    I’d also put ****
>
> cd $PBS_O_WORKDIR****
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> ** **
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> in the script before runrun, and probably also use****
>
> ./runrun  in case ./ is not in your path.****
>
> ** **
>
> ** **
>
> James Coyle, PhD****
>
> High Performance Computing Group        ****
>
>  Iowa State Univ.          ****
>
> web: http://jjc.public.iastate.edu/ <http://www.public.iastate.edu/~jjc>**
> **
>
> ** **
>
> ** **
>
> ** **
>
> *From:* torqueusers-bounces at supercluster.org [mailto:
> torqueusers-bounces at supercluster.org] *On Behalf Of *Fabio Andrijauskas
> *Sent:* Thursday, January 24, 2013 6:46 AM
> *To:* torqueusers at supercluster.org
> *Subject:* [torqueusers] Job can't find the execubtale****
>
> ** **
>
> Hi all,****
>
> I am trying to submit a job to my new cluster with the script:
>
> #!/bin/bash
> #PBS -l walltime=00:5:00
> #PBS -l nice=19
> #PBS -q linux-spool
> #PBS -e 2.err
> #PBS -o 1.out
>
> runrun****
>
> the 2.err: /var/spool/torque/mom_priv/****
>
> jobs/77.server.SC: line 8: runrun: command not found****
>
> ** **
>
> But, to be successful in the process is necessary to copy the software
> (runrun) to the nodes manually . Is mandatory to use NFS with torque ?****
>
>
>
> --
> Fabio Andrijauskas
> http://www.marvinproject.org****
>
> http://fabio.andrijauskas.com.br/****
>
> Céus limpos......****
>
> _______________________________________________
> torqueusers mailing list
> torqueusers at supercluster.org
> http://www.supercluster.org/mailman/listinfo/torqueusers
>
>


-- 
Fabio Andrijauskas
http://www.marvinproject.org
http://fabio.andrijauskas.com.br/
Céus limpos......
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