[torqueusers] TORQUE-3.0.3 on Mac OS X 10.7.2

Rashid, Z. (Zahid) Z.Rashid at uu.nl
Mon Jan 16 09:33:24 MST 2012


Instead of using the mach_absolute_time(.....) suggested by Jon, I used gettimeofday(.....) as described on the page;

http://www.clusterresources.com/bugzilla/attachment.cgi?id=95&action=diff

which obviously works. 
With another minor change (i.e., changing mom_mach.c:130 #include <ufs/ufs/quota.h> to #include <sys/quota.h> because the earlier does not work) I get another error during <make>

gcc -g -O2 -o .libs/pbs_mom catch_child.o mom_comm.o mom_inter.o mom_main.o mom_server.o prolog.o requests.o start_exec.o checkpoint.o tmsock_recov.o req_quejob.o job_func.o attr_recov.o dis_read.o job_attr_def.o job_recov.o process_request.o reply_send.o resc_def_all.o job_qs_upgrade.o  darwin/libmommach.a ../lib/Libattr/libattr.a ../lib/Libsite/libsite.a ../lib/Libutils/libutils.a ../lib/Libpbs/.libs/libtorque.dylib -lpthread -lrt
ld: library not found for -lrt
collect2: ld returned 1 exit status
make[3]: *** [pbs_mom] Error 1
make[2]: *** [all-recursive] Error 1
make[1]: *** [all-recursive] Error 1
make: *** [all-recursive] Error 1

I tried Google to get some clue but did not get anywhere yet. Any help/suggestion?

Regards.

Zahid

________________________________________
From: torqueusers-bounces at supercluster.org [torqueusers-bounces at supercluster.org] on behalf of Jon Bringhurst [jonb at lanl.gov]
Sent: 13 January 2012 23:02
To: Torque Users Mailing List
Subject: Re: [torqueusers] TORQUE on Mac OS X 10.7.2

Instead of clock_gettime(...) you need to use mach_absolute_time(...).

http://developer.apple.com/library/mac/#qa/qa1398/_index.html

Example patch that was used for mysqld: http://lists.mysql.com/commits/70966

-Jon

On Jan 13, 2012, at 2:43 PM, Rashid, Z. (Zahid) wrote:

> Dear All,
>
> I am trying to compile TORQUE on Mac Book Pro (Intel Core i7, NCores = 4) with OS X 10.7.2, Xcode 4.2, and gcc 4.2.1 [Target: i686-apple-darwin11
> Configured with: /private/var/tmp/llvmgcc42/llvmgcc42-2336.1~1/src/configure --disable-checking --enable-werror --prefix=/Developer/usr/llvm-gcc-4.2 --mandir=/share/man --enable-languages=c,objc,c++,obj-c++ --program-prefix=llvm- --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ --with-slibdir=/usr/lib --build=i686-apple-darwin11 --enable-llvm=/private/var/tmp/llvmgcc42/llvmgcc42-2336.1~1/dst-llvmCore/Developer/usr/local --program-prefix=i686-apple-darwin11- --host=x86_64-apple-darwin11 --target=i686-apple-darwin11 --with-gxx-include-dir=/usr/include/c++/4.2.1
> Thread model: posix
> gcc version 4.2.1 (Based on Apple Inc. build 5658) (LLVM build 2336.1.00)] installed.
>
> I want to compile TORQUE on this machine.
>
> Torque-3.0.3 configured with
>
> only "configure" gives the following error when I do "make"
>
>  gcc -DHAVE_CONFIG_H -I. -I. -I../../../src/include -I../../../src/include -I../../../src/lib/Libdis -DIFF_PATH=\"/usr/local/torque/sbin/pbs_iff\" -DPBS_DEFAULT_FILE=\"/var/spool/torque/server_name\" -DPBS_SERVER_HOME=\"/var/spool/torque\" -g -O2 -MT pbsD_connect.lo -MD -MP -MF .deps/pbsD_connect.Tpo -c ../Libifl/pbsD_connect.c  -fno-common -DPIC -o .libs/pbsD_connect.o
> ../Libifl/pbsD_connect.c: In function ‘send_unix_creds’:
> ../Libifl/pbsD_connect.c:688: error: ‘struct ucred’ has no member named ‘cr_uid’
> ../Libifl/pbsD_connect.c:689: error: ‘struct ucred’ has no member named ‘cr_groups’
> make[3]: *** [pbsD_connect.lo] Error 1
> make[2]: *** [all-recursive] Error 1
> make[1]: *** [all-recursive] Error 1
> make: *** [all-recursive] Error 1
>
> With
>
> configure --disable-unixsockets --disable-gcc-warnings
>
> or
>
> configure --with-default-server=name --with-server-home=/var/spool/pbs --with-rcp=scp --disable-unixsockets --disable-gcc-warnings
>
> or
>
> configure --with-default-server=name --with-server-home=/var/spool/pbs --with-rcp=scp --host=x86_64-apple-darwin11 --build=x86_64-apple-darwin11 --target=x86_64-apple-darwin11 --disable-unixsockets  --disable-gcc-warnings
>
> always gives the following error when I run "make" command.
>
> if gcc -DHAVE_CONFIG_H -I. -I. -I../../../src/include  -I../../../src/include   -g -O2 -MT u_dynamic_string.o -MD -MP -MF ".deps/u_dynamic_string.Tpo" -c -o u_dynamic_string.o u_dynamic_string.c; \
> then mv -f ".deps/u_dynamic_string.Tpo" ".deps/u_dynamic_string.Po"; else rm -f ".deps/u_dynamic_string.Tpo"; exit 1; fi
> u_threadpool.c: In function ‘work_thread’:
> u_threadpool.c:246: error: ‘CLOCK_REALTIME’ undeclared (first use in this function)
> u_threadpool.c:246: error: (Each undeclared identifier is reported only once
> u_threadpool.c:246: error: for each function it appears in.)
> make[3]: *** [u_threadpool.o] Error 1
> make[3]: *** Waiting for unfinished jobs....
> make[2]: *** [all-recursive] Error 1
> make[1]: *** [all-recursive] Error 1
> make: *** [all-recursive] Error 1
>
> In "configure" it does not show any error or warning message.
>
> I also tried the older versions of TORQUE
> TORQUE-3.0.0 version gives error
>
> if gcc -DHAVE_CONFIG_H -I. -I. -I../../src/include  -I../../src/include  -DPBS_SERVER_HOME=\"/var/spool/pbs\" -DPBS_ENVIRON=\"/var/spool/pbs/pbs_environment\" -g -O2 -MT req_runjob.o -MD -MP -MF ".deps/req_runjob.Tpo" -c -o req_runjob.o req_runjob.c; \
> then mv -f ".deps/req_runjob.Tpo" ".deps/req_runjob.Po"; else rm -f ".deps/req_runjob.Tpo"; exit 1; fi
> req_runjob.c: In function ‘post_sendmom’:
> req_runjob.c:1135: error: ‘ulong’ undeclared (first use in this function)
> req_runjob.c:1135: error: (Each undeclared identifier is reported only once
> req_runjob.c:1135: error: for each function it appears in.)
> req_runjob.c:1135: error: expected ‘;’ before ‘addr’
> req_runjob.c:1266: error: ‘addr’ undeclared (first use in this function)
> make[2]: *** [req_runjob.o] Error 1
> make[1]: *** [all-recursive] Error 1
> make: *** [all-recursive] Error 1
>
> while TORQUE-2.5.0 or earlier versions give
>
> if gcc -DHAVE_CONFIG_H -I. -I. -I../../../src/include  -I../../../src/include -DPBS_MOM -DDEMUX=\"/usr/local/torque/sbin/pbs_demux\"   -g -O2 -MT mom_mach.o -MD -MP -MF ".deps/mom_mach.Tpo" -c -o mom_mach.o mom_mach.c; \
> then mv -f ".deps/mom_mach.Tpo" ".deps/mom_mach.Po"; else rm -f ".deps/mom_mach.Tpo"; exit 1; fi
> mom_mach.c:130:27: error: ufs/ufs/quota.h: No such file or directory
> mom_mach.c: In function ‘quota’:
> mom_mach.c:3002: error: storage size of ‘qi’ isn’t known
> mom_mach.c:3166: error: ‘Q_GETQUOTA’ undeclared (first use in this function)
> mom_mach.c:3166: error: (Each undeclared identifier is reported only once
> mom_mach.c:3166: error: for each function it appears in.)
> make[3]: *** [mom_mach.o] Error 1
> make[2]: *** [all-recursive] Error 1
> make[1]: *** [all-recursive] Error 1
> make: *** [all-recursive] Error 1
>
> I also tried the Intel icc instead of gcc in all cases but it does not seem compiler dependent errors.
> With version 3.0.3, perhaps the "clock_gettime(CLOCK_REALTIME, &ts);" is not available in Max OS X. but how can I get around this? Any help with any of the above versions of TORQUE would be appreciated.
>
> Regards.
>
> Zahid
> _______________________________________________
> torqueusers mailing list
> torqueusers at supercluster.org
> http://www.supercluster.org/mailman/listinfo/torqueusers

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