[torqueusers] How to run mpirun of intel on torque

David Roman David.Roman at noveltis.fr
Thu Dec 20 02:52:55 MST 2012


Hello,

Thank you for this post. I tried it, but when I start my code with mpirun ./my_code, mpirun wants to use mpiexec.hydra but no mpiexec.

I look option in mpirun to use mpiexec and not mpiexec.hydra

David


-----Message d'origine-----
De : torqueusers-bounces at supercluster.org [mailto:torqueusers-bounces at supercluster.org] De la part de Christopher Samuel
Envoyé : mercredi 19 décembre 2012 23:35
À : torqueusers at supercluster.org
Objet : Re: [torqueusers] How to run mpirun of intel on torque

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On 14/12/12 23:52, David Roman wrote:

> But now, I install MPI Intel Librarie and Ifort.

You probably want to look at the OSC mpiexec replacement which knows how to speak to Torque via the TM interface and can launch Intel MPI jobs for you.

https://www.osc.edu/~djohnson/mpiexec/

We build ours with:

./configure --with-pbs=/usr/local/torque/latest --with-default-comm=mpich2-pmi --prefix=/usr/local/$(basename $(pwd) | sed 's#-#/#')

You'll need to adjust the various paths in that to get it to work for you of course.

Best of luck,
Chris
- -- 
 Christopher Samuel        Senior Systems Administrator
 VLSCI - Victorian Life Sciences Computation Initiative
 Email: samuel at unimelb.edu.au Phone: +61 (0)3 903 55545
 http://www.vlsci.org.au/      http://twitter.com/vlsci

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