[torqueusers] Batch not running : Things to check
Coyle, James J [ITACD]
jjc at iastate.edu
Wed Sep 14 09:59:56 MDT 2011
Welcome to Torque. I switched from NQS some time ago, and Torque/PBS has been a good replacement for me.
Things to check:
What does the error output say? ( Probably in file dn_test.txt.e[0-9]* )
Permissions on /home/zarnocda/torque/scripts_test/dn_test.sh , is it executable?
You may need: chmod u+x /home/zarnocda/torque/scripts_test/dn_test.sh
I'd also check if /home/zarnocda/torque/scripts_test/dn_test.sh
even exists on the compute node.
e.g. ls /home/zarnocda/torque/scripts_test/dn_test.sh executable
I usually use the interactive opion ( qsub -I ) to debug these kinds of problems.
You could issue:
qsub -V -I -l nodes=1 -q dn
which will start an interactive jobs and log you into the mother superior node for that job
where you can then try issuing the commands within your job that is not working.
James Coyle, PhD
High Performance Computing Group
Iowa State Univ.
From: torqueusers-bounces at supercluster.org [mailto:torqueusers-bounces at supercluster.org] On Behalf Of Zarnoch, Dave
Sent: Wednesday, September 14, 2011 8:42 AM
To: torqueusers at supercluster.org
Subject: [torqueusers] Batch not running
New to Torque, used to run NQS....
I have a small script:
$ more dn_test.sh
When I submit the script:
qsub -V -l nodes=1 -q dn dn_test.sh
It runs fine.
But I need to run batch...
I created a text file "dn_test.txt"
When I run:
qsub -V -l nodes=1 -q dn dn_test.txt
It appears to process the file:
Job id Name User Time Use S Queue
------------------------- ---------------- --------------- -------- - -----
7592.usphl1ora002.amer dn_test.txt zarnocda 0 R dn
But it doesn't excute the script within:
UNIX Systems Administration
Dave.Zarnoch at sykes.com
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