[torqueusers] wrong pbs server name
Samir Gartner
jigzat at gmail.com
Thu May 21 14:40:45 MDT 2009
Sorry for being so insistent but I have like 8 days to finish my graduation
proyect.
It seems that the jobs now try to start but there is no output except an
email that says someting like this:
>From adm at rufian.perrera.local Tue Apr 21 15:28:59 2009
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Date: Tue, 21 Apr 2009 15:28:58 -0500
From: adm <adm at rufian.perrera.local>
Message-Id: <200904212028.n3LKSwro006752 at rufian.perrera.local>
To: samir at rufian.perrera.local
Subject: PBS JOB 21.rufian.perrera.local
PBS Job Id: 21.rufian.perrera.local
Job Name: STDIN
Exec host: rufian.perrera.local/0
Aborted by PBS Server
Job does not exist on node
2009/5/21 Samir Gartner <jigzat at gmail.com>
> Ok Gus and everyone. Thanks again for your answers.
>
> There is no pbs_sched on /etc/init.d but it is here:
>
> /usr/local/src/torque-2.3.6/contrib/init.d/pbs_sched
> /usr/local/src/torque-2.3.6/tpackages/server/opt/pbs/sbin/pbs_sched
> /usr/local/src/torque-2.3.6/src/scheduler.cc/.libs/pbs_sched
> /usr/local/src/torque-2.3.6/src/scheduler.cc/pbs_sched
> /opt/pbs/sbin/pbs_sched
>
> I was thinking copying /opt/pbs/sbin/pbs_sched to /etc/init.d. Is it right
> to do that?
>
> Sorry about the "manually" word. It is local slang I guess. What I mean is
> that I went to the /opt/pbs/sbin/ folder and executed ./pbs_sched
>
> hostname output is:
>
> rufian.perrera.local
>
> hosts file contain:
>
> # Do not remove the following line, or various programs
> # that require network functionality will fail.
> #127.0.0.1 localhost.localdomain localhost
> <--------------------------Is this wrong?
> ::1 localhost6.localdomain6 localhost6
> 127.0.0.1 rufian.perrera.local rufian
> 192.168.2.6 auyin.perrera.local auyin
> 192.168.2.4 pelusa.perrera.local pelusa
> 192.168.2.2 lamparita.perrera.local lamparita
>
>
> network content is:
>
> NETWORKING=yes
> HOSTNAME=rufian.perrera.local
> DOMAINNAME=perrera.local
>
> I dont have /etc/sysconfig/pbs_server nor /etc/sysconfig/pbs_sched either
>
>
> 2009/5/21 Gus Correa <gus at ldeo.columbia.edu>
>
> Samir Gartner wrote:
>> > Ok, scheduling wasn't enabled,now it is,
>>
>> It happens very often.
>> Fixing it is a good first step.
>>
>> > but pbs_sched service was not
>> > found.
>>
>> Starting up daemons in YDog may be different from RHEL, CentOS, Fedora,
>> so I am just guessing based on the latter. Not familiar to YDog.
>> Anyway ...
>>
>> Don't know if you got Torque from ClusterResources or other.
>> In any case, there should be a pbs_sched script on /etc/init.d
>> If it is there, do "chkconfig --add pbs_sched" (or YDog equivalent),
>> then do "chkconfig --list pbs_sched" to see which runlevels it will be
>> on, then "service pbs_sched start" to start it, or if YDog doesn't have
>> "service", run it with "/etc/init.d/pbs_sched start".
>>
>> If you don't have the pbs_sched script in /etc/init.d, you may find one
>> in the contrib subdirectory of the Torque source tree.
>> Copy it over to /etc/init.d, and do the above.
>> (The location may be other than /etc/init.d in YDog.)
>>
>>
>> > I didn't install maui, it is a default installation. About hosts
>> > file, it is properly configured as well as nodes and mom's config files.
>> >
>>
>> You only need Maui if you want a complex scheduling policy.
>> pbs_sched is FIFO, very simple, but works fine.
>> I've used it for a long time without problems.
>>
>> > when I manually start pbs_sched it says
>> >
>> > pbs_sched: addclient, host localhost not found
>> >
>>
>> Hmm ... never got this one, not that I remember.
>> Not sure what you mean by "manually start pbs_sched".
>> Anyway, sounds as another, different, problem.
>>
>>
>> Is it possible that your "hostname" command
>> is not resolving your server name to rufian.perrera.local but to
>> localhost?
>> What is the output of "hostname"?
>> What do you have in /etc/hosts?
>> What do you have in /etc/sysconfig/network?
>>
>> Just in case you have /etc/sysconfig/pbs_server and
>> /etc/sysconfig/pbs_sched, what is the contents?
>> (I don't have them.)
>>
>> (Again just guessing, YDog may have different files to startup things.)
>>
>> I hope this helps,
>> Gus Correa
>> ---------------------------------------------------------------------
>> Gustavo Correa
>> Lamont-Doherty Earth Observatory - Columbia University
>> Palisades, NY, 10964-8000 - USA
>> ---------------------------------------------------------------------
>>
>> >
>> > 2009/5/21 Samir Gartner <jigzat at gmail.com <mailto:jigzat at gmail.com>>
>> >
>> > I think I'm gonna cry.... I love you guys!! No, seriously, it worked
>> > but only if executed under root user, now the question is what did I
>> > do wrong? Jobs should start automatically, right?
>> >
>> > I was following first the Globus tootlikt tutorial but it is kinda
>> > outdated so I guess I issued some wrong instructions.
>> >
>> > On of the weird things was that the tutorial suggested using the
>> > /opt/pbs prefix when executing configure and now I have under
>> > /opt/pbs again a /opt/pbs folder with repeated bin and sbin folders
>> > and executables. Is this wrong or is how it is supposed to be?
>> >
>> > 2009/5/21 Ling C. Ho <ling at fnal.gov <mailto:ling at fnal.gov>>
>> >
>> > Have you configured a scheduler?
>> >
>> > What if you use qrun. Would any job starts?
>> >
>> > ...
>> > ling
>> >
>> > Samir Gartner wrote:
>> >
>> > Ok, I don't see any file named default_server but
>> > server_name has the right server name rufian.perrera.local
>> > and there is another file with the same content named
>> > server_name.new.
>> >
>> > Righ now the PSB server name apears to be correct (after
>> > stoping the server and manually deletting the zombie jobs)
>> > but stil the jobs won't start.
>> >
>> >
>> > [samir at rufian ~]$ echo "sleep 30;date" | /opt/pbs/bin/qsub
>> > [samir at rufian ~]$ /opt/pbs/bin/qstat -a
>> >
>> > rufian.perrera.local:
>> >
>> > Req'd Req'd Elap
>> > Job ID Username Queue Jobname
>> > SessID NDS TSK Memory Time S Time
>> > -------------------- -------- -------- ----------------
>> > ------ ----- --- ------ ----- - -----
>> > 13.rufian.perrer samir batch STDIN
>> > -- 1 -- -- 01:00 Q --
>> > [samir at rufian ~]$
>> >
>> >
>> > by the way, is it top posting allowed??
>> >
>> > 2009/5/21 Jerry Smith <jdsmit at sandia.gov
>> > <mailto:jdsmit at sandia.gov> <mailto:jdsmit at sandia.gov
>> > <mailto:jdsmit at sandia.gov>>>
>> >
>> >
>> > Samir,
>> >
>> > What do you have in
>> $PBS_HOME/{server_name,default_server}?
>> >
>> > It should be what resolves as the ethernet address that
>> > pbs should
>> > be listening on.
>> >
>> > --Jerry
>> >
>> >
>> >
>> >
>> > Samir Gartner wrote:
>> >
>> > Ok I finally installed torque under yellowdog/ppc but
>> > now I have
>> > another problem. I set up my pbs server as
>> > rufian.perrera.local
>> > but when I issue a job it shows itself in
>> > localhost.localdomain
>> > and it stays on queued state forever. And if i try to
>> > qdel the
>> > job it cant reach the server and the conection times
>> > out. Any
>> > ideas of what could be wrong?
>> > I'm not trying to set up anything complicated, is
>> > just one
>> > machine that works as server and client.
>> >
>> > this is the shell output
>> >
>> > [root at rufian bin]# /opt/pbs/bin/qstat -a
>> >
>> > rufian.perrera.local:
>> >
>> > Req'd Req'd Elap
>> > Job ID Username Queue Jobname
>> > SessID
>> > NDS TSK Memory Time S Time
>> > -------------------- -------- --------
>> > ---------------- ------
>> > ----- --- ------ ----- - -----
>> > 7.localhost.loca samir batch STDIN
>> > -- 1 -- -- 01:00 Q --
>> > 8.localhost.loca samir batch STDIN
>> > -- 1 -- -- 01:00 Q --
>> > 9.localhost.loca samir batch STDIN
>> > -- 1 -- -- 01:00 Q --
>> > 10.localhost.loc samir batch STDIN
>> > -- 1 -- -- 01:00 Q --
>> > [root at rufian bin]# /opt/pbs/bin/qdel
>> > 7.localhost.localdomain
>> > Connection timed out
>> > qdel: cannot connect to server localhost.localdomain
>> > (errno=110)
>> > Connection timed out
>> > You have new mail in /var/spool/mail/root
>> > [root at rufian bin]# /opt/pbs/bin/qdel
>> > 7.rufian.perrera.local
>> > qdel: Unknown Job Id 7.rufian.perrera.local
>> > [root at rufian bin]# su - samir
>> > [samir at rufian ~]$ /opt/pbs/bin/qdel
>> > 7.localhost.localdomain
>> > Connection timed out
>> > qdel: cannot connect to server localhost.localdomain
>> > (errno=110)
>> > Connection timed out
>> > [samir at rufian ~]$
>> >
>> >
>> >
>> >
>> >
>> ------------------------------------------------------------------------
>> >
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>> > torqueusers at supercluster.org
>> > <mailto:torqueusers at supercluster.org>
>> > http://www.supercluster.org/mailman/listinfo/torqueusers
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> > ------------------------------------------------------------------------
>> >
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