[torqueusers] builgin openmpi with torque
Tony Schreiner
schreian at bc.edu
Thu May 22 14:01:00 MDT 2008
I'm trying to build openmpi 1.2.6 with torque 2.3.0 on CentOS 5
I built openmpi with
configure --with-tm=/usr/local
and I thought it build ok, at least
/usr/local/bin/ompi_info
includes
MCA ras: tm (MCA v1.0, API v1.3, Component v1.2.6)
MCA pls: tm (MCA v1.0, API v1.3, Component v1.2.6)
When I run a simple MPI test however I only runs on one node
I submitted with
qsub -l nodes=linux06+linux07+linux08+linux09 dompiscript
and then contents of $PBS_NODEFILE is indeed those same hosts
and I am starting the prorgram with
mpiexec --verbose ./mp
with the mpiexec I just built.
yet my program debug lines show
initializing MPI
MPI nprocs=1 me=0
Process 0 of 1 running on processor linux06
and I get these errors in the error file
libibverbs: Fatal: couldn't read uverbs ABI version.
------------------------------------------------------------------------
--
[0,1,0]: OpenIB on host linux06 was unable to find any HCAs.
Another transport will be used instead, although this may result in
lower performance.
------------------------------------------------------------------------
--
------------------------------------------------------------------------
--
[0,1,0]: uDAPL on host linux06 was unable to find any NICs.
Another transport will be used instead, although this may result in
lower performance.
------------------------------------------------------------------------
--
I don't in fact have Infiiband on these hosts. Did I miss some
options I needed to build openmpi?
Thanks
Tony Schreiner
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