[torqueusers] Troubleshooting qsub -I interactive queue jobs
Atwood, Robert C
r.atwood at imperial.ac.uk
Mon Sep 3 09:17:30 MDT 2007
Hi:
Yes, the dhcp client was overwriting the /etc/resolv.conf I tried
stuffing everything in /etc/hosts. But that is not working. Perhaps I
have done it incorrectly . But I am able to login to nodes by name, and
log from node to master either as 'master' or as its hostname. However,
I cannot log to an outside machine from the node using the hostname, I
also need to solve that (not for Torque though, but if you recommmend a
document to read I would be grateful, I have not actually had to deal
with this before since the initial configuration JUST WORKED until now,
and on the previous cluster)
With this situation I have the behaviour I described in the previous
message.
Thanks again
Robert
I have done the files like so.
/etc/hosts:
127.0.0.1 localhost.beowulf.cluster localhost
10.141.255.254 master.beowulf.cluster master
10.141.0.1 node01 node01.beowulf.cluster
(etc)
/var/spool/torque/server_priv/nodes:
node01 np=2 x11
(etc)
> -----Original Message-----
> From: Aaron Knister [mailto:aaron at iges.org]
> Sent: 03 September 2007 15:47
> To: Atwood, Robert C
> Cc: torqueusers at supercluster.org
> Subject: Re: [torqueusers] Troubleshooting qsub -I
> interactive queue jobs
>
> How is the cluster doing name resolution? Have you stuffed
> everything in /etc/hosts or is there a local dns server
> running? If you're running a local dns server check to make
> sure the dhcp client hasn't overwritten your local dns server
> in /etc/resolv.conf.
>
> -Aaron
>
> On Sep 3, 2007, at 8:56 AM, Atwood, Robert C wrote:
>
>
> Hi,
> For some reason jobs using qsub -I are immediately
> exiting. Until very
> recently this was not happening, -I jobs worked
> correctly. The main
> change is that the outside network has changed requirng
> us to run dhcp
> client for the outside network. I am not sure why this
> should affect the
> cluster network but that's all I can think of that's
> different from just
> a few days ago when this was working.
> I have looked at MOM log on the node and server log on
> the master
> (appended below), I don't see what is wrong, it just
> says 'Failure job
> exec failure'? What does this mean and how may I find
> out what is
> causing it?
>
>
> Thanks
> Robert
>
>
>
>
>
> command line capture <<<<<<<<<<<<<<<<
>
> ~> qsub -I -l nodes=node04.beowulf.cluster
> qsub: waiting for job 12892.mt-hive2.mt.ic.ac.uk to start
> qsub: job 12892.mt-hive2.mt.ic.ac.uk apparently deleted
>
>
>
> mom_log on node04
> <<<<<<<<<<<<<<<<<<<<
>
> 09/03/2007 13:44:32;0100; pbs_mom;Req;;Type QueueJob
> request received
> from PBS_Server at master.beowulf.cluster, sock=10
> 09/03/2007 13:44:32;0100; pbs_mom;Req;;Type
> ReadyToCommit request
> received from PBS_Server at master.beowulf.cluster, sock=10
> 09/03/2007 13:44:32;0100; pbs_mom;Req;;Type Commit
> request received
> from PBS_Server at master.beowulf.cluster, sock=10
> 09/03/2007 13:44:39;0100; pbs_mom;Req;;Type StatusJob
> request received
> from PBS_Server at master.beowulf.cluster, sock=11
> 09/03/2007 13:44:52;0001; pbs_mom;Job;TMomFinalizeJob3;job not
> started, Failure job exec failure, before files staged, no retry
> 09/03/2007 13:44:52;0008;
> pbs_mom;Req;send_sisters;sending ABORT to
> sisters
> 09/03/2007 13:44:52;0100; pbs_mom;Req;;Type DeleteJob
> request received
> from PBS_Server at master.beowulf.cluster, sock=10
>
>
>
>
> server log on master <<<<<<<<<<<<<<<<<<<<
>
> 09/03/2007 13:44:26;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007 13:44:26;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007 13:44:26;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007 13:44:26;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007 13:44:26;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007 13:44:32;0100;PBS_Server;Req;;Type
> AuthenticateUser request
> received from rcatwood at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007 13:44:32;0100;PBS_Server;Req;;Type QueueJob
> request received
> from rcatwood at mt-hive2.mt.ic.ac.uk, sock=9
> 09/03/2007 13:44:32;0100;PBS_Server;Req;;Type
> ReadyToCommit request
> received from rcatwood at mt-hive2.mt.ic.ac.uk, sock=9
> 09/03/2007 13:44:32;0100;PBS_Server;Req;;Type Commit
> request received
> from rcatwood at mt-hive2.mt.ic.ac.uk, sock=9
> 09/03/2007
>
> 13:44:32;0100;PBS_Server;Job;12892.mt-hive2.mt.ic.ac.uk;enqueuing into
> default, state 1 hop 1
> 09/03/2007
>
> 13:44:32;0100;PBS_Server;Job;12892.mt-hive2.mt.ic.ac.uk;dequeuing from
> default, state QUEUED
> 09/03/2007
>
> 13:44:32;0100;PBS_Server;Job;12892.mt-hive2.mt.ic.ac.uk;enqueuing into
> short, state 1 hop 1
> 09/03/2007
> 13:44:32;0008;PBS_Server;Job;12892.mt-hive2.mt.ic.ac.uk;Job
> Queued at request of rcatwood at mt-hive2.mt.ic.ac.uk, owner =
> rcatwood at mt-hive2.mt.ic.ac.uk, job name = STDIN, queue = short
> 09/03/2007
> 13:44:32;0040;PBS_Server;Svr;mt-hive2.mt.ic.ac.uk;Scheduler
> sent command new
> 09/03/2007 13:44:32;0100;PBS_Server;Req;;Type
> StatusServer request
> received from Scheduler at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007 13:44:32;0100;PBS_Server;Req;;Type StatusNode request
> received from Scheduler at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007 13:44:32;0100;PBS_Server;Req;;Type
> StatusQueue request
> received from Scheduler at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007 13:44:32;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007 13:44:32;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007 13:44:32;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007 13:44:32;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007 13:44:32;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007 13:44:32;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007 13:44:32;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007 13:44:32;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007 13:44:32;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007 13:44:32;0100;PBS_Server;Req;;Type
> ResourceQuery request
> received from Scheduler at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007 13:44:32;0100;PBS_Server;Req;;Type ModifyJob
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007
> 13:44:32;0008;PBS_Server;Job;12892.mt-hive2.mt.ic.ac.uk;Job
> Modified at request of Scheduler at mt-hive2.mt.ic.ac.uk
> 09/03/2007 13:44:32;0100;PBS_Server;Req;;Type RunJob
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007
> 13:44:32;0008;PBS_Server;Job;12892.mt-hive2.mt.ic.ac.uk;Job
> Run at request of Scheduler at mt-hive2.mt.ic.ac.uk
> 09/03/2007
> 13:44:37;0040;PBS_Server;Svr;mt-hive2.mt.ic.ac.uk;Scheduler
> sent command recyc
> 09/03/2007 13:44:50;0100;PBS_Server;Req;;Type
> AuthenticateUser request
> received from rsingh at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007 13:44:50;0100;PBS_Server;Req;;Type
> StatusServer request
> received from rsingh at mt-hive2.mt.ic.ac.uk, sock=9
> 09/03/2007 13:44:50;0100;PBS_Server;Req;;Type StatusJob
> request received
> from rsingh at mt-hive2.mt.ic.ac.uk, sock=9
> 09/03/2007 13:44:52;0100;PBS_Server;Req;;Type
> JobObituary request
> received from pbs_mom at node04, sock=9
> 09/03/2007
>
> 13:44:52;0010;PBS_Server;Job;12892.mt-hive2.mt.ic.ac.uk;Exit_status=-1
> resources_used.cput=00:00:00 resources_used.mem=0kb
> resources_used.vmem=0kb resources_used.walltime=00:00:20
> 09/03/2007
>
> 13:44:52;0008;PBS_Server;Job;12892.mt-hive2.mt.ic.ac.uk;on_job_exit
> valid pjob: 0x594790 (substate=50)
> 09/03/2007
>
> 13:44:52;0008;PBS_Server;Job;12892.mt-hive2.mt.ic.ac.uk;on_job_exit
> valid pjob: 0x594790 (substate=52)
> 09/03/2007
>
> 13:44:52;0008;PBS_Server;Job;12892.mt-hive2.mt.ic.ac.uk;on_job_exit
> valid pjob: 0x594790 (substate=53)
> 09/03/2007
>
> 13:44:52;0100;PBS_Server;Job;12892.mt-hive2.mt.ic.ac.uk;dequeuing from
> short, state COMPLETE
> 09/03/2007
> 13:44:52;0040;PBS_Server;Svr;mt-hive2.mt.ic.ac.uk;Scheduler
> sent command term
> 09/03/2007 13:44:52;0100;PBS_Server;Req;;Type
> StatusServer request
> received from Scheduler at mt-hive2.mt.ic.ac.uk, sock=11
> 09/03/2007 13:44:52;0100;PBS_Server;Req;;Type StatusNode request
> received from Scheduler at mt-hive2.mt.ic.ac.uk, sock=11
> 09/03/2007 13:44:52;0100;PBS_Server;Req;;Type
> StatusQueue request
> received from Scheduler at mt-hive2.mt.ic.ac.uk, sock=11
> 09/03/2007 13:44:52;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=11
> 09/03/2007 13:44:52;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=11
> 09/03/2007 13:44:52;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=11
> 09/03/2007 13:44:52;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=11
> 09/03/2007 13:44:52;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=11
> 09/03/2007 13:44:52;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=11
> 09/03/2007 13:44:52;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=11
> 09/03/2007 13:44:52;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=11
> 09/03/2007 13:44:52;0100;PBS_Server;Req;;Type SelStat
> request received
> from Scheduler at mt-hive2.mt.ic.ac.uk, sock=11
> 09/03/2007 13:45:02;0100;PBS_Server;Req;;Type
> AuthenticateUser request
> received from rcatwood at mt-hive2.mt.ic.ac.uk, sock=10
> 09/03/2007 13:45:02;0100;PBS_Server;Req;;Type LocateJob
> request received
> from rcatwood at mt-hive2.mt.ic.ac.uk, sock=9
> 09/03/2007 13:45:02;0080;PBS_Server;Req;req_reject;Reject reply
> code=15001(Unknown Job Id), aux=0, type=LocateJob, from
> rcatwood at mt-hive2.mt.ic.ac.uk
> _______________________________________________
> torqueusers mailing list
> torqueusers at supercluster.org
> http://www.supercluster.org/mailman/listinfo/torqueusers
>
>
> Aaron Knister
> Associate Systems Administrator/Web Designer
> Center for Research on Environment and Water
>
> (301) 595-7001
> aaron at iges.org
>
>
>
>
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