[torqueusers] "cp command failed"
Zhiliang Hu
zhu at iastate.edu
Tue Dec 11 10:55:59 MST 2007
As preciously described my "qsub -l nodes=6:ppn=2 hello_script" works fine on our cluster.
Now I am having problems with "qsub" a mpiblast script (this script works fine by itself on command line, using 6 nodes/12 processors). It complains (in the torque output file xxxx.e96):
----------------------
cp command failed!
command: cp /raid/pub/ncbi/blast/mpidb/bta.genome.chr.007.nhr /scratch/tmp/bta.genome.chr.007.nhr
source = /raid/pub/ncbi/blast/mpidb/bta.genome.chr.007.nhr
dest = /scratch/tmp/bta.genome.chr.007.nhr
ret_value = 32512
----------------------
It is not file permission problem as I can do copy/ssh manually. I Googled for the error but didn't find any useful hint. As the script runs by itself I tend to think this might be a torque problem? Any suggestion is appreciated.
Thanks!
Zhiliang
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