[torqueusers] torque 2.1.2-r2 & maui 3.1.2-p16 don't execute jobs
properly
Benj FitzPatrick
benjfitz at yahoo.com
Mon Nov 20 14:23:58 MST 2006
Hello,
I finally got around to trying torque, and
have run into some issues. I have gotten job
submission/execution to work with a simple awk job where I
count to 10000 10^4 times using nested for loops. That is, I
see the awk job pop up on the compute node and it takes about
15 seconds. However, when I try a g03 or a molpro job they
get submitted, but they finish immediately and have used no
resources (according to the torque logs). I have made sure
that the environment variables are set correctly, so I am
stumped. I'd appreciate any advice you can give me.
Thanks,
Benj
PS I attached the script I use below.
#!/bin/sh
#specify name
#PBS -N awk
#run queue
#PBS -q batch
#num procs
#PBS -l nodes=1:ppn=1
cd /ab/benjfitz/tests
export
LD_LIBRARY_PATH="/opt/compiler_libs/pathscale/lib/2.5:/opt/compiler_libs/pathscale/lib/2.5/32:/opt/compiler_libs/intel/compiler91/lib:/opt/compiler_libs/intel/fortran91/lib"
touch dme.txt
echo "touch done" >./dme.txt
date >>./dme.txt
echo "$LD_LIBRARY_PATH" >>./dme.txt
echo "library path done" >>./dme.txt
date >>./dme.txt
awk 'BEGIN {for(i=0;i<10000;i++)for(j=0;j<10000;j++);}'
echo "awk done" >>./dme.txt
date >>./dme.txt
molpro <./normal_ccsd.com
echo "molpro done" >>./dme.txt
date >>./dme.txt
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