[Mauiusers] Requesting a given number of processors
Toni L. Harbaugh-Blackford [Contr]
harbaugh at ncifcrf.gov
Fri Sep 28 08:14:45 MDT 2007
On Fri, 28 Sep 2007, Jan Ploski wrote:
> "Toni L. Harbaugh-Blackford [Contr]" <harbaugh at ncifcrf.gov> schrieb am
> 09/28/2007 02:35:50 PM:
>
> >
> > Jan-
> >
> > Depending on how you have things configured, you may be able to use
> > '-l ncpus=100'.
>
> Toni,
>
> Thanks for the tip. Unfortunately it doesn't work in our cluster. (I am
> the administrator, so if you happen to know any options that influence it,
> please share.) I think ncpus=100 makes it look for a machine with 100
> processors. I get 'rejected : CPU' lines in the output of checkjob -v.
>
> It's amazing that these trivial matters seem not to be documented
> anywhere.
It may be something in your configuration, although I have never tried
this asking for 100 cpus, only 8, and was able to get it to work.
Are you using "nodes=", either in your torque queue configurations or
on the qsub command line? If you submit a job and it stays queued,
what does the qstat -f look like?
Thanks,
Toni
>
> Best regards,
> Jan Ploski
>
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Toni Harbaugh-Blackford harbaugh at ncifcrf.gov
System Administrator
Advanced Biomedical Computing Center (ABCC)
National Cancer Institute
Contractor - SAIC/Frederick
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